
Full text loading...
Covalent attachment of ubiquitin-like proteins (Ubls) is a predominant mechanism for regulating protein function in eukaryotes. Several structurally related Ubls, such as ubiquitin, SUMO, NEDD8, and ISG15, modify a vast number of proteins, altering their functions in a variety of ways. Ubl modifications can affect the target's half-life, subcellular localization, enzymatic activity, or ability to interact with protein or DNA partners. Generally, these diverse Ubls are covalently attached via their C termini to their targets by parallel, but specific, cascades involving three classes of enzymes known as E1, E2, and E3. Structures are now available for many protein complexes in E1-E2-E3 cascades, revealing a series of modular building blocks and providing mechanistic insights into their functions.
Article metrics loading...
Full text loading...
Data & Media loading...
Insights into conformational changes accompanying Ubl transfer come from a recent crystal structure of a trapped Ubl activation complex for the NEDD8 pathway (Huang et al. 2007. Nature 445:394--98). The structure contains NEDD8's heterodimeric E1 (APPBP1-UBA3), two molecules of NEDD8 (one thioester-linked to E1, the other bound noncovalently at the adenylation active site), a catalytically inactive E2 (Ubc12), and MgATP. The structure indicates that the covalent attachment of NEDD8 to its E1's catalytic cysteine induces conformational changes that expose E2 binding sites. The results suggest that during Ubl cascades, each reaction induces conformational changes and alters interaction networks to drive the next step in conjugation.Note Added in Proof